Fig. 5

LEfSe results of differentially abundant genera for chicks hatched in the hatchery (HH) vs. on-farm (HOF) on day 7 (A), day 14 (B), and day 38 (C). Only genera with an FDR ≤ 0.05 and an absolute value of LDA > 2 are presented. The left-hand side of each plot indicates bacterial genera enriched in HH chickens, and on the right-hand side, bacterial genera enriched in HOF chickens