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Fig. 5 | Animal Microbiome

Fig. 5

From: The Bacterial and pathogenic landscape of African buffalo (Syncerus caffer) whole blood and serum from Kenya

Fig. 5

Phylogenetic trees of (A) Anaplasma and (B) Mycoplasma V12 amplicons with related sequences from NCBI and/or SILVA 138.1. Both trees were midpoint rooted and the Mycoplasma tree was trimmed to the minimum sub-tree capturing OTU leaves. Placement of OTU sequences are labeled in blue with their inferred genus followed by the number of samples positive with high confidence in whole blood and serum, respectively. Sequences from databases are labeled in black with genus, species, and strain (if available from metadata) followed by sequence database accessions. Several clades were collapsed for plotting. The species labels within collapsed clades are provided with the number of occurrences. Both trees were rendered with iTOL

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Animal Microbiome

ISSN: 2524-4671