Table 2 Differentially abundant taxa between different genetic groups, with a minimum mean difference of 0.50 SD and a P0 value greater than 0.95. Genera are indicated based on the group in which they are more abundant
From: Characterization of microbiota signatures in Iberian pig strains using machine learning algorithms
Comparison groups | Differentially abundant taxa |
|---|---|
EE-RR | Terrisporobacter (*), Clostridium sensu stricto 1 (*), Butyricicoccus (*), Romboutsia (*), Family XIII UCG 001 (*), Lachnospiraceae FCS020 group (*), UCG 002 (*), Eubacterium brachy group (*), Escherichia Shigella (*), Lactobacillus (-), Limosilactobacillus (-), Acetitomaculum (-), UCG 008 (-), Paludicola (-), Ruminococcus gnavus group (-), Eubacterium fissicatena group (*) |
EE-RE | Colidextribacter (-), Acetitomaculum (-), Phascolarctobacterium (*), Escherichia-Shigella (*) |
EE-ER | Colidextribacter (-), Acetitomaculum (-), UCG-008 (-), Paludicola (-), Eubacterium fissicatena group (-), Fusicatenibacter (*), Escherichia-Shigella (*) |
ER-RR | Ruminococcus (*) |
ER-RE | - |
RE-RR | - |
EE maternal group vs. RR maternal group | - |
EE paternal group vs. RR paternal group | Acetitomaculum (-) |
Purebred vs. crossbred | - |